# Gallery

A collection of examples demonstrating PyNutil's capabilities.

```{toctree}
:maxdepth: 1
:hidden:

demo_brainrender_cells
demo_brainrender_volume
demo_coronal_sections
```

::::{grid} 1 2 2 3
:gutter: 3

:::{grid-item-card} Visualising cells in brainrender
:link: demo_brainrender_cells
:link-type: doc
:img-top: ../assets/gallery/brainrender_cells.png

Plot cell coordinates in a 3D brainrender scene, coloured by atlas region.
:::

:::{grid-item-card} Plotting PyNutil volumes in brainrender
:link: demo_brainrender_volume
:link-type: doc
:img-top: ../assets/gallery/calbindin-1-3d.png

Render an interpolated expression volume as a 3D heatmap directly in brainrender.
:::

:::{grid-item-card} Coronal cross-sections with expression heatmap
:link: demo_coronal_sections
:link-type: doc
:img-top: ../assets/gallery/calb1_cross_section.png

Display a grid of coronal sections with the Allen STPT background and a magma
expression overlay.
:::

::::