PyNutil.save_analysis#

PyNutil.save_analysis(output_folder, result, atlas_labels, label_df=None, *, colormap='gray', settings_dict=None)[source]#

Save analysis output to the specified directory.

Parameters:

  • output_folder – Directory to write output files.

  • result – ExtractionResult from coordinate extraction.

  • atlas_labels – Atlas labels DataFrame (or AtlasData — .labels used).

  • label_df – Whole-series quantification DataFrame.

  • colormap – Colormap for MeshView intensity output.

  • settings_dict – Optional dict written to pynutil_settings.json.