Gallery

A collection of examples demonstrating PyNutil’s capabilities.

Visualising cells in brainrender

Plot cell coordinates in a 3D brainrender scene, coloured by atlas region.

Visualising cells in brainrender

Plotting PyNutil volumes in brainrender

Render an interpolated expression volume as a 3D heatmap directly in brainrender.

Visualising PyNutil volumes in brainrender

Coronal cross-sections with expression heatmap

Display a grid of coronal sections with the Allen STPT background and a magma expression overlay.

Coronal cross-sections with expression heatmap